Re: Fwd: Re: [Fwd: Golden]

On Wed, 13 May 2009, Gregory S. Duane wrote:

> Hi Mary:
>
>
>> As a side, exactly what does the following echo back:
>>
>> nm /usr/local/ncl_ncarg-5.1.0DaP/lib/libncarg.a | grep plchhq
>> nm /usr/local/ncl_ncarg-5.1.0DaP/lib/libncarg.a | grep cpezct
>>

>
> They both say "no such file"

Greg,

The compilation is finding the "libncarg.a" library somewhere, because
otherwise the compilation would have failed and said something
like "cannot find libncarg.a".

Do you have multiple versions of NCAR Graphics installed on your
machine?

When you ran the NCAR Graphics "./Configure" script, where
did you tell it to install the software?

--Mary

> I believe we are indeed missing libraries. So what do we do?
>
> Rob isn't here right now, but according to his email below,
> we did compile with -fno-underscoring.
>
> Greg
>
>
>
>
>
>>
>> On Wed, 13 May 2009, Gregory S. Duane wrote:
>>
>>> To whom it may concern:
>>>
>>> We are having trouble installing NCAR Graphics in a linux
>>> enviroment at U. Miami, as per the following email, even
>>> though the software indicates successful installation.
>>>
>>> More about the envrionment: It is x86_64 and I believe
>>> the version information is contained in
>>> "2.6.22.19-0.1-default #1 SMP"
>>>
>>> The error messages in compilation are listed below.
>>>
>>> Please advise if you can. Thanks.
>>>
>>> Greg Duane
>>>
>>> ---- Original message ----
>>>> Date: Tue, 12 May 2009 16:36:08 -0400
>>>> From: Robert Burgman <rburgman_at_rsmas.miami.edu>
>>>> Subject: Re: [Fwd: Golden]
>>>> To: "Gregory S. Duane" <Gregory.Duane_at_Colorado.EDU>
>>>>
>>>> Hi Greg,
>>>>
>>>> I am not having much luck compiling the code beyond these changes.
>>>> I am using gfortran for the compilation.
>>>> I am using the option -fno-underscoring, this reduces the errors
>>>> significantly
>>>> Libraries you were calling in /usr/X11R6/lib64 are found in /usr/lib64
>>>>
>>>> so i am calling
>>>>
>>>> gfortran -fPIC -fno-f2c -fno-underscoring -O qgpvx.varc.AM.f -L/usr/
>>>> local/ncl_ncarg-5.1.0DaP/lib -L/usr/lib64 -lncarg -lncarg_gks -
>>>> lncarg_c -lX11 -lXext -lpng -lz
>>>>
>>>>
>>>> and am given the following errors.
>>>>
>>>>
>>>> /tmp/cc495DN9.o: In function `pltcs':
>>>> qgpvx.varc.AM.f:(.text+0x8130): undefined reference to `plchhq'
>>>> qgpvx.varc.AM.f:(.text+0x8160): undefined reference to `cpezct'
>>>> /tmp/cc495DN9.o: In function `force':
>>>> qgpvx.varc.AM.f:(.text+0x8c10): undefined reference to `cpezct'
>>>> /tmp/cc495DN9.o: In function `MAIN__':
>>>> qgpvx.varc.AM.f:(.text+0xd982): undefined reference to `opngks'
>>>> qgpvx.varc.AM.f:(.text+0xd99f): undefined reference to `pcseti'
>>>> qgpvx.varc.AM.f:(.text+0xedc4): undefined reference to `clsgks'
>>>> collect2: ld returned 1 exit status
>>>>
>>>>
>>>> The "undefined references to 'xxxxxxx'"
>>>> makes me think there are errors with the underscores. All of these
>>>> references are in the
>>>> /usr/local/ncl_ncarg-5.1.0DaP/lib/libncarg.a library.
>>>>
>>>>
>>>>
>>>> On May 12, 2009, at 10:30 AM, Gregory S. Duane wrote:
>>>>
>>>>> Rob:
>>>>>
>>>>> I've tried all three of these. I always get "undefined
>>>>> reference" messages in ld to various NCAR graphics
>>>>> subroutines. -on my way to U. Miami now -Greg
>>>>>
>>>>> ---- Original message ----
>>>>>> Date: Tue, 12 May 2009 08:33:43 -0400 (EDT)
>>>>>> From: rburgman_at_rsmas.miami.edu
>>>>>> Subject: Re: [Fwd: Golden]
>>>>>> To: "Gregory S. Duane" <Gregory.Duane_at_Colorado.EDU>
>>>>>>
>>>>>> Hi Duane,
>>>>>> To complile the fortran code qgpvx.varc.AM.f you can use
>>>>>>
>>>>>> /usr/bin/gcc (which includes g77),
>>>>>>
>>>>>> /opt/intel/fce/10.1.015/bin/ifort,
>>>>>>
>>>>>> or
>>>>>>
>>>>>> /usr/bin/gfortran
>>>>>>
>>>>>>
>>>>>>
>>>>>>> Rob:
>>>>>>>
>>>>>>> But how would I actually compile code, such as qgpvx.varc.AM.f
>>>>>>> in my home directory? When I type ncargf90 qgpvx.varc.AM.f,
>>>>>>> I get:
>>>>>>>
>>>>>>> g77 -fPIC -fno-f2c -fno-second-underscore -O qgpvx.varc.AM.f
>>>>>>> -L/usr/local/ncl_nc
>>>>>>> arg-5.1.0DaP/lib -L/usr/X11R6/lib64 -lncarg -lncarg_gks -lncarg_c -
>>>>>>> lX11
>>>>>>> -lXext -
>>>>>>> lpng -lz
>>>>>>> g77: Command not found.
>>>>>>>
>>>>>>> Greg
>>>>>>>
>>>>>>> ---- Original message ----
>>>>>>>> Date: Mon, 11 May 2009 17:39:41 -0400
>>>>>>>> From: Robert Burgman <rburgman_at_rsmas.miami.edu>
>>>>>>>> Subject: Re: [Fwd: Golden]
>>>>>>>> To: "Gregory S. Duane" <Gregory.Duane_at_Colorado.EDU>
>>>>>>>>
>>>>>>>> HI Greg,
>>>>>>>> If you set up your path and NCARG_root as seen below you should be
>>>>>>>> ready to run ncar graphics from you command line.
>>>>>>>>
>>>>>>>> For example in .bashrc
>>>>>>>>
>>>>>>>> PATH="/usr/local/ncl_ncarg-5.1.0DaP/bin:"
>>>>>>>>
>>>>>>>> export NCARG_ROOT=/usr/local/ncl_ncarg-5.1.0DaP;
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> The .hluresfile is just a preference file, I downloaded the
>>>>>>>> following
>>>>>>>> example from the web.
>>>>>>>>
>>>>>>>> !=========================================
>>>>>>>> ! comments for ".res" files are preceded by a "!"
>>>>>>>> ! remember quotations are not used in .res files
>>>>>>>>
>>>>>>>> ! White background/black foreground
>>>>>>>> *wkForegroundColor : (/0.,0.,0./)
>>>>>>>> *wkBackgroundColor : (/1.,1.,1./)
>>>>>>>>
>>>>>>>> *wkColorMap : rainbow+gray
>>>>>>>>
>>>>>>>> ! Font stuff
>>>>>>>> *Font : helvetica
>>>>>>>>
>>>>>>>> ! Function Codes [Default is a colon ]
>>>>>>>> *TextFuncCode : ~
>>>>>>>>
>>>>>>>> ! Make default X11 window larger (adjust as necessary)
>>>>>>>> *wkWidth : 800
>>>>>>>> *wkHeight : 800
>>>>>>>>
>>>>>>>> ! Have a favorite colormap that you use for everything? You can
>>>>>>>> ! make it your default here (note the name is NOT in quotes):
>>>>>>>> ! *wkColorMap : temp1
>>>>>>>>
>>>>>>>> ! Increase the default (16mb) contour memory
>>>>>>>> ! If you gave gridded data > 500 x 500, you may need this
>>>>>>>> *wsMaximumSize: 32556688
>>>>>>>> !==========================================
>>>>>>>>
>>>>>>>> I don't know if it is necessary or not, you can just copy the text
>>>>>>>> above into the file and make changes as you wish.
>>>>>>>>
>>>>>>>> Hope this helps,
>>>>>>>> Rob
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> On May 11, 2009, at 3:17 PM, Gregory S. Duane wrote:
>>>>>>>>
>>>>>>>>> Dear Rob:
>>>>>>>>>
>>>>>>>>> I assume you are the contact point for this. I am leaving
>>>>>>>>> for the airport very soon, and may want to work on this
>>>>>>>>> late this evening, so I thought it might help to ask a few
>>>>>>>>> simple questions now.
>>>>>>>>>
>>>>>>>>> 1) Do I need NCL to run NCAR graphics subroutines?
>>>>>>>>>
>>>>>>>>> 2) Could you quickly tell me what NCARG ROOT should be set to?
>>>>>>>>>
>>>>>>>>> 3) Do I really need an hluresfile?
>>>>>>>>>
>>>>>>>>> Note that I do *not* need access data at NCAR or anywhere
>>>>>>>>> else. I just to use NCAR graphics subroutines and idt.
>>>>>>>>> -leaving now. Thanks.
>>>>>>>>>
>>>>>>>>> Greg
>>>>>>>>>
>>>>>>>>>
>>>>>>>>> ---- Original message ----
>>>>>>>>>> Date: Sat, 9 May 2009 07:52:58 -0400 (EDT)
>>>>>>>>>> From: "Ben Kirtman" <bkirtman_at_rsmas.miami.edu>
>>>>>>>>>> Subject: [Fwd: Golden]
>>>>>>>>>> To: Gregory.Duane_at_Colorado.EDU
>>>>>>>>>>
>>>>>>>>>> I have not look into this yet, so this is all I know. -Ben
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>> ---------------------------- Original Message
>>>>>>>>>> ----------------------------
>>>>>>>>>> Subject: Golden
>>>>>>>>>> From: "Robert Burgman" <rburgman_at_rsmas.miami.edu>
>>>>>>>>>> Date: Fri, May 8, 2009 3:40 pm
>>>>>>>>>> To: "Ben Kirtman" <bkirtman_at_rsmas.miami.edu>
>>>>>>>>>> --------------------------------------------------------------------------
>>>>>>>>>>
>>>>>>>>>> We are in business, he will have to get set up on Pacifix
>>>>>>>>>> ( paths,
>>>>>>>>>> preferences etc)
>>>>>>>>>>
>>>>>>>>>> software is located in /usr/local/ncl_ncarg-5.1.0DaP/
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>> Here is the link for setup.
>>>>>>>>>>
>>>>>>>>>> http://www.ncl.ucar.edu/get_started.shtml#SetUpEnvironment
>>>>>>>>>>
>>>>>>>>>> We have the OPENDAP version installed so he can access data at
>>>>>>>>>> NCAR
>>>>>>>>>> or
>>>>>>>>>> wherever via URLs.
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>> -Rob
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>> --------------------------------------------------
>>>>>>>>>> Robert Burgman
>>>>>>>>>> Division of Meteorology and Physical Oceanography
>>>>>>>>>> Rosenstiel School of Marine and Atmospheric Science
>>>>>>>>>> University of Miami
>>>>>>>>>> 4600 Rickenbacker Causeway
>>>>>>>>>> Miami, FL 33149
>>>>>>>>>>
>>>>>>>>>> Tel: (305) 421-4272
>>>>>>>>>> Fax: (305) 421-4696
>>>>>>>>>> Email: rburgman_at_rsmas.miami.edu
>>>>>>>>>> ---------------------------------------------------
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>> --
>>>>>>>>>> Ben Kirtman
>>>>>>>>>> Professor of Meteorology and Physical Oceanography
>>>>>>>>>> Rosenstiel School for Marine and Atmospheric Science
>>>>>>>>>> University of Miami
>>>>>>>>>> 4600 Rickenbacker Causeway
>>>>>>>>>> Miami, Florida 33149-1031
>>>>>>>>>> Phone: 305-421-4046
>>>>>>>>>> Fax: 305-421-4696
>>>>>>>>>>
>>>>>>>>
>>>>>>>> --------------------------------------------------
>>>>>>>> Robert Burgman
>>>>>>>> Division of Meteorology and Physical Oceanography
>>>>>>>> Rosenstiel School of Marine and Atmospheric Science
>>>>>>>> University of Miami
>>>>>>>> 4600 Rickenbacker Causeway
>>>>>>>> Miami, FL 33149
>>>>>>>>
>>>>>>>> Tel: (305) 421-4272
>>>>>>>> Fax: (305) 421-4696
>>>>>>>> Email: rburgman_at_rsmas.miami.edu
>>>>>>>> ---------------------------------------------------
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>
>>>>>>
>>>>>>
>>>>>> ----------------------------------------------------
>>>>>> Dr. Robert Burgman
>>>>>> Division of Meteorology and Physical Oceanography
>>>>>> Rosenstiel School of Marine and Atmospheric Science
>>>>>> University of Miami MPO, MSC 237
>>>>>> 4600 Rickenbacker Causeway
>>>>>> Miami, FL 33149
>>>>>>
>>>>>> Tel: (305) 421-4272
>>>>>> Fax: (305) 421-4696
>>>>>> Email: rburgman_at_rsmas.miami.edu
>>>>>> ---------------------------------------------------
>>>>>>
>>>>>>
>>>>
>>>> --------------------------------------------------
>>>> Robert Burgman
>>>> Division of Meteorology and Physical Oceanography
>>>> Rosenstiel School of Marine and Atmospheric Science
>>>> University of Miami
>>>> 4600 Rickenbacker Causeway
>>>> Miami, FL 33149
>>>>
>>>> Tel: (305) 421-4272
>>>> Fax: (305) 421-4696
>>>> Email: rburgman_at_rsmas.miami.edu
>>>> ---------------------------------------------------
>>>>
>>>>
>>>>
>>>>
>>>>
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Received on Wed May 13 2009 - 15:21:53 MDT