Re: Installing opendap-enabled NCL

From: Mary Haley <haley_at_nyahnyahspammersnyahnyah>
Date: Fri, 18 Sep 2009 13:25:46 -0600 (MDT)

Mateus,

It appears that compiling with V4.3.x of gfortran and linking
against V4.1.2 compiled libraries is not compatible, unfortunately.

I just checked the V4.3.2 and V4.1.2 versions of "libgfortran.a",
and only V4.1.2 has this symbol. That's why it is undefined
when you try to link against it using V4.3.2 of gfortran.

I guess I would stick with using the 4.3.2 version of everything, with
the "ncl" from V4.1.2.

--Mary

On Fri, 18 Sep 2009, Mateus Teixeira wrote:

> Mary,
>
> I did what you have suggested and it works. I could successfuly
> compile my program and use OPeNDAP functionality of NCL. Thanks a lot.
>
> Just to inform you, below are the errors I getting when compiling
> programs with opendap-enabled NCL binaries compiled with gcc 421.
>
> Here is the line that compile the program:
>
> ifort -o terrain.exe -i_dynamic ia.o anal2.o bint.o bndry.o crlnd.o
> crter.o dfclrs.o exaint.o finprt.o fudger.o interp.o label.o lakes.o
> latlon.o llxy.o mxmnll.o nestll.o oned.o outpt.o output.o pltter.o
> rdldtr.o replace.o rflp.o setup.o sint.o smth121.o smther.o smthtr.o
> terdrv.o terrain.o tfudge.o vtran.o xyobsll.o hiresmap.o plots.o
> crvst.o crvst30s.o nestbdy.o crsoil.o equate.o labels.o labelv.o
> patch.o plotcon.o watercheck.o crlwmsk.o soil_tg.o water_vfr.o
> check_data.o terrestial_info.o write_fieldrec.o
> -L/usr/local/ncarg_opendap//lib -lncarg -lncarg_gks -lncarg_c
> -L/usr/lib -lpng -lgfortran -lX11
> -L/usr/lib/gcc/i386-redhat-linux/3.4.6 -lg2c
>
> And here are some lines of the errors:
>
> /usr/local/ncarg_opendap//lib/libncarg.a(cpcldm.o): In function
> `cpcldm_':
> cpcldm.f:(.text+0x8ab): undefined reference to `_gfortran_copy_string'
> cpcldm.f:(.text+0xaf5): undefined reference to `_gfortran_pow_r4_i4'
> cpcldm.f:(.text+0xb79): undefined reference to `_gfortran_pow_r4_i4'
> cpcldm.f:(.text+0xf36): undefined reference to `_gfortran_copy_string'
>
> ....
> ....
> ....
>
> /usr/local/ncarg_opendap//lib/libncarg_gks.a(gcrsg.o): In function `gcrsg_':
> gcrsg.f:(.text+0x16c): undefined reference to `_gfortran_copy_string'
> gcrsg.f:(.text+0x723): undefined reference to `_gfortran_copy_string'
> /usr/local/ncarg_opendap//lib/libncarg_gks.a(gcsgwk.o): In function `gcsgwk_':
> gcsgwk.f:(.text+0x2b6): undefined reference to `_gfortran_copy_string'
> gcsgwk.f:(.text+0x2ec): undefined reference to `_gfortran_copy_string'
> /usr/local/ncarg_opendap//lib/libncarg_gks.a(gdsg.o): In function `gdsg_':
> gdsg.f:(.text+0x16e): undefined reference to `_gfortran_copy_string'
> /usr/local/ncarg_opendap//lib/libncarg_gks.a(gdsg.o):gdsg.f:(.text+0x1b2):
> more undefined references to `_gfortran_copy_string' follow
> make[1]: [terrain.exe] Erro 1 (ignorado)
>
>
> Best regards,
>
> Mateus
>
>
> 2009/9/18 Mary Haley <haley_at_ucar.edu>:
>>
>> Mateus,
>>
>> I assume you want a 32-bit binary, because we do have a 64-bit opendap
>> binary built with V4.3.2.  Unfortunately, I don't have a 32-bit
>> version.
>>
>> We might be able to fix the compilation problems with the current
>> version that you have. What exact error messages are you getting?
>>
>> If the V4.2.1 version of "ncl" is working for you, then the other
>> possibility is that you can keep the 4.3.2 version of the NCL package
>> installed, but then copy over just the "ncl" executable from the
>> V4.2.1 package.
>>
>> For example, let's say V4.3.2 of the non-opendap enabled NCL is
>> installed in /usr/local/{bin,lib,include}. This means that
>> /usr/local/bin/ncl is not opendap-enabled.
>>
>> Then, assume you have the opendap V4.2.1 installed in
>> /home/mateus/{bin,include,lib}.  The /home/mateus/bin/ncl is thus
>> opendap-enabled.
>>
>> You can simply do the following:
>>
>>  mv /usr/local/bin/ncl /usr/local/bin/ncl.nondap
>>  cp /home/mateus/bin/ncl /usr/local/bin/.
>>
>>
>> --Mary
>>
>> On Fri, 18 Sep 2009, Mateus Teixeira wrote:
>>
>>> Dear NCL maintainers,
>>>
>>> I would like to install the opendap-enabled NCL in my Fedora 10
>>> system. It has gcc version 4.3.2.
>>> I have installed the binaries compiled with gcc 4.2.1, but I'm having
>>> a lot of compilation errors in programs that use ncar graphics.
>>> These compilation problems disappear when I use the
>>> non-opendap-enabled NCL compiled with gcc version 4.3.2.
>>>
>>> Could be possible to make available a version of opendap-enabled NCL
>>> binaries compiled with gcc version 4.3.2?
>>>
>>> Best regards,
>>>
>>>
>>> --
>>> Mateus da Silva Teixeira
>>> Meteorologista
>>> Instituto de Pesquisas Meteorológicas - IPMet
>>> Universidade Estadual Paulista - UNESP
>>> Av. Luis Edmundo Carrijo Coube, 14-01 - Cx. Postal 281 - CEP 17033-360
>>> Bauru - SP - Brasil
>>> Fone: +55 14 3103-6030 / fax: 3203-3649
>>>
>>> Registered Linux User #466740 (http://counter.li.org/)
>>> _______________________________________________
>>> ncl-install mailing list
>>> List instructions, subscriber options, unsubscribe:
>>> http://mailman.ucar.edu/mailman/listinfo/ncl-install
>>
>
>
>
> --
> Mateus da Silva Teixeira
> Meteorologista
> Instituto de Pesquisas Meteorológicas - IPMet
> Universidade Estadual Paulista - UNESP
> Av. Luis Edmundo Carrijo Coube, 14-01 - Cx. Postal 281 - CEP 17033-360
> Bauru - SP - Brasil
> Fone: +55 14 3103-6030 / fax: 3203-3649
>
> Registered Linux User #466740 (http://counter.li.org/)
>

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Received on Fri Sep 18 2009 - 13:25:46 MDT

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