Dave B,
Thanks for the update and also for checking Jamie's script against
the new release. We look forward to the new release.
--Dave
David Brown wrote:
> Hi Dave,
>
> The original message that Jamie sent contained an attachment that
> exceeded the size limits set for the
> mailing list. That is why it was 'lost'.
>
> We believe we have fixed the addfiles bug that Erik reported and it will
> be part of a new bug-fix release
> that should be ready in a week or so.
>
> The bug Erik reported related to non-unity strides along the aggregated
> dimension. Jamie's situation seems
> to be different, but perhaps it is related. We will analyze it and make
> sure that it is resolved before the new
> release.
> -dave
>
>
> On May 15, 2009, at 2:51 PM, Dave Allured wrote:
>
>> I think this may be the same "addfiles" bug in NCL v5.1.0 that was
>> reported by Erik Noble on April 27. According to the NCAR reply,
>> "It's a pretty significant bug" and "we are currently fixing".
>>
>> http://www.ncl.ucar.edu/Support/talk_archives/2009/0809.html
>>
>> There is a lost ncl-talk message from this morning. I had the
>> chance to see Jamie's original symptoms from internal
>> correspondence. Originally there were messages like the following
>> related to use of the time dimension, after addfiles. This is very
>> similar to what Erik reported.
>>
>> :ncid 31: NetCDF: Index exceeds dimension bound
>> ncvargets: ncid 31: NetCDF: Index exceeds dimension bound
>> ncvargets: ncid 31: NetCDF: Index exceeds dimension bound
>> ncvargets: ncid 31: NetCDF: Index exceeds dimension bound
>> etc.
>>
>> How is work on the original addfiles bug coming along?
>>
>> Dave Allured
>> CU/CIRES Climate Diagnostics Center (CDC)
>> http://cires.colorado.edu/science/centers/cdc/
>> NOAA/ESRL/PSD, Climate Analysis Branch (CAB)
>> http://www.cdc.noaa.gov/psd1/
>>
>> Jamie Scott wrote:
>>> Sorry, I spoke too soon. Changing the ListSetType from "join" to "cat"
>>> allows me to read in the first 30 files, but I get a new error when
>>> trying to read in the next 30. Again, this script runs fine on
>>> ncl 5.0.1, but does not work on ncl 5.1.0. Looks like it's having
>>> trouble cleaning up the netCDF file connections....
>>>
>>> -Jamie
>>>
>>> modified script:
>>>
>>>
>>>
>>> output from ncl:
>>>
>>> [mac23:/Projects/Air_Sea/jscott] jscott% $NCARG_ROOT/bin/ncl
>>> /home/jscott/ncl/WBC/hires.winds.4xd2.mon.mean.ncl
>>> Copyright (C) 1995-2009 - All Rights Reserved
>>> University Corporation for Atmospheric Research
>>> NCAR Command Language Version 5.1.0
>>> The use of this software is governed by a License Agreement.
>>> See http://www.ncl.ucar.edu/ for more details.
>>>
>>>
>>> Variable: innames
>>> Type: string
>>> Total Size: 124 bytes
>>> 31 values
>>> Number of Dimensions: 1
>>> Dimensions and sizes: [31]
>>> Coordinates:
>>> (0) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871001.nc
>>> (1) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871002.nc
>>> (2) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871003.nc
>>> (3) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871004.nc
>>> (4) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871005.nc
>>> (5) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871006.nc
>>> (6) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871007.nc
>>> (7) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871008.nc
>>> (8) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871009.nc
>>> (9) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871010.nc
>>> (10) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871011.nc
>>> (11) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871012.nc
>>> (12) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871013.nc
>>> (13) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871014.nc
>>> (14) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871015.nc
>>> (15) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871016.nc
>>> (16) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871017.nc
>>> (17) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871018.nc
>>> (18) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871019.nc
>>> (19) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871020.nc
>>> (20) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871021.nc
>>> (21) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871022.nc
>>> (22) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871023.nc
>>> (23) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871024.nc
>>> (24) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871025.nc
>>> (25) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871026.nc
>>> (26) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871027.nc
>>> (27) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871028.nc
>>> (28) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871029.nc
>>> (29) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871030.nc
>>> (30) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871031.nc
>>> (0)
>>> (0) Sea Surface Wind: x-component: min=-46.5873 max=37.9598
>>> (0)
>>> (0) Sea Surface Wind: y-component: min=-44.5245 max=37.7156
>>> (0) 1987 9-------------------------
>>> (0)
>>> (0) wind speed: min=0 max=29.6
>>> (0) Month: 9 Year:1987
>>>
>>>
>>> Variable: innames
>>> Type: string
>>> Total Size: 120 bytes
>>> 30 values
>>> Number of Dimensions: 1
>>> Dimensions and sizes: [30]
>>> Coordinates:
>>> (0) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871101.nc
>>> (1) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871102.nc
>>> (2) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871103.nc
>>> (3) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871104.nc
>>> (4) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871105.nc
>>> (5) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871106.nc
>>> (6) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871107.nc
>>> (7) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871108.nc
>>> (8) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871109.nc
>>> (9) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871110.nc
>>> (10) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871111.nc
>>> (11) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871112.nc
>>> (12) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871113.nc
>>> (13) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871114.nc
>>> (14) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871115.nc
>>> (15) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871116.nc
>>> (16) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871117.nc
>>> (17) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871118.nc
>>> (18) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871119.nc
>>> (19) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871120.nc
>>> (20) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871121.nc
>>> (21) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871122.nc
>>> (22) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871123.nc
>>> (23) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871124.nc
>>> (24) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871125.nc
>>> (25) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871126.nc
>>> (26) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871127.nc
>>> (27) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871128.nc
>>> (28) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871129.nc
>>> (29) /Projects/Air_Sea/jscott/noaa.highres/SeaWinds/uv19871130.nc
>>> add_connect: too many connects, cannot add another
>>> ncinquire: ncid -1: NetCDF: Not a valid ID
>>> add_connect: too many connects, cannot add another
>>> ncinquire: ncid -1: NetCDF: Not a valid ID
>>> add_connect: too many connects, cannot add another
>>> ncinquire: ncid -1: NetCDF: Not a valid ID
>>> add_connect: too many connects, cannot add another
>>> ncinquire: ncid -1: NetCDF: Not a valid ID
>>> add_connect: too many connects, cannot add another
>>> ncinquire: ncid -1: NetCDF: Not a valid ID
>>> add_connect: too many connects, cannot add another
>>> ncinquire: ncid -1: NetCDF: Not a valid ID
>>> add_connect: too many connects, cannot add another
>>> ncinquire: ncid -1: NetCDF: Not a valid ID
>>> add_connect: too many connects, cannot add another
>>> ncinquire: ncid -1: NetCDF: Not a valid ID
>>> add_connect: too many connects, cannot add another
>>> ncinquire: ncid -1: NetCDF: Not a valid ID
>>> add_connect: too many connects, cannot add another
>>> ncinquire: ncid -1: NetCDF: Not a valid ID
>>> add_connect: too many connects, cannot add another
>>> ncinquire: ncid -1: NetCDF: Not a valid ID
>>> add_connect: too many connects, cannot add another
>>> ncinquire: ncid -1: NetCDF: Not a valid ID
>>> add_connect: too many connects, cannot add another
>>> ncinquire: ncid -1: NetCDF: Not a valid ID
>>> add_connect: too many connects, cannot add another
>>> ncinquire: ncid -1: NetCDF: Not a valid ID
>>> add_connect: too many connects, cannot add another
>>> ncinquire: ncid -1: NetCDF: Not a valid ID
>>> add_connect: too many connects, cannot add another
>>> ncinquire: ncid -1: NetCDF: Not a valid ID
>>> add_connect: too many connects, cannot add another
>>> ncinquire: ncid -1: NetCDF: Not a valid ID
>>> add_connect: too many connects, cannot add another
>>> ncinquire: ncid -1: NetCDF: Not a valid ID
>>> add_connect: too many connects, cannot add another
>>> ncinquire: ncid -1: NetCDF: Not a valid ID
>>> add_connect: too many connects, cannot add another
>>> ncinquire: ncid -1: NetCDF: Not a valid ID
>>> add_connect: too many connects, cannot add another
>>> ncinquire: ncid -1: NetCDF: Not a valid ID
>>> add_connect: too many connects, cannot add another
>>> ncinquire: ncid -1: NetCDF: Not a valid ID
>>> add_connect: too many connects, cannot add another
>>> ncinquire: ncid -1: NetCDF: Not a valid ID
>>> add_connect: too many connects, cannot add another
>>> ncinquire: ncid -1: NetCDF: Not a valid ID
>>> add_connect: too many connects, cannot add another
>>> ncinquire: ncid -1: NetCDF: Not a valid ID
>>> add_connect: too many connects, cannot add another
>>> ncinquire: ncid -1: NetCDF: Not a valid ID
>>> add_connect: too many connects, cannot add another
>>> ncinquire: ncid -1: NetCDF: Not a valid ID
>>> add_connect: too many connects, cannot add another
>>> ncinquire: ncid -1: NetCDF: Not a valid ID
>>> add_connect: too many connects, cannot add another
>>> ncinquire: ncid -1: NetCDF: Not a valid ID
>>> add_connect: too many connects, cannot add another
>>> ncinquire: ncid -1: NetCDF: Not a valid ID
>>> fatal:No valid instance of variable u found in file list
>>> fatal:Execute: Error occurred at or near line 53 in file
>>> /home/jscott/ncl/WBC/hires.winds.4xd2.mon.mean.ncl
>>>
>>> [mac23:/Projects/Air_Sea/jscott] jscott%
>>> On May 15, 2009, at 10:57 AM, Jamie Scott wrote:
>>>
>>>> I've been testing ncl version 5.1.0 on Mac 0SX 10.5.6 (Darwin Kernel
>>>> Version 9.6.0: Mon Nov 24 17:39:01 PST 2008;
>>>> root:xnu-1228.9.59~1/RELEASE_PPC)
>>>> and discovered a problem reading multple netcdf files. This code
>>>> works fine on the same machine in ncl v 5.0.1.
>>>>
>>>> Here is a portion the output from v 5.1.0 (the rest is attached in a
>>>> file called '5.1.0.err.msg'. (very long!)) :
>>>>
>>>
>>>
>>> ------------------------------------------------------------------------
>>>
>>> _______________________________________________
>>> ncl-talk mailing list
>>> List instructions, subscriber options, unsubscribe:
>>> http://mailman.ucar.edu/mailman/listinfo/ncl-talk
>> _______________________________________________
>> ncl-talk mailing list
>> List instructions, subscriber options, unsubscribe:
>> http://mailman.ucar.edu/mailman/listinfo/ncl-talk
>
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Received on Fri May 15 2009 - 15:19:29 MDT
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