Re: ncl_filedump problem in HDF5

Yes, I am using NCL binary of ncl_ncarg-5.2.0.Linux_RedHat_x86_64_gcc412.tar.gz.
My platform is running CentOS 5.4 64bit with gcc version 4.12.
Because I don't have other platforms available, I didn't test the other binaries.
Thanks!

>>On Apr 20, 2010, at 6:57 AM, Dennis Shea wrote:
>
>> This is a bug.
>>
>
>This needs to be amended that this appears to be an issue on 64-bit
>LINUX systems. We were
>able to view the file fine on a Mac and a 32-bit Linux system.
>
>We are looking into this and will provide a fix if possible.
>
>Exactly which NCL binary did you download, and have you
>seen this problem on other machines running 5.2.0?
>
>Thanks,
>
>--Mary
>
>> Other OMI-Aura he5 files can be read. EG:
>>
>> %> ncl_filedump OMI-Aura_L3-OMTO3e_2009m0101_v003-2009m0223t121826.he5
>>
>> Copyright (C) 1995-2010 - All Rights Reserved
>> University Corporation for Atmospheric Research
>> NCAR Command Language Version 5.2.0
>> The use of this software is governed by a License Agreement.
>> See http://www.ncl.ucar.edu/ for more details.
>> Variable: f (file variable)
>>
>> filename: OMI-Aura_L3-OMTO3e_2009m0101_v003-2009m0223t121826
>> path: OMI-Aura_L3-OMTO3e_2009m0101_v003-2009m0223t121826.he5
>> file global attributes:
>> Period_OMI_Column_Amount_O3 : Daily
>> EndUTC_OMI_Column_Amount_O3 : 2009-01-02T11:45:00.000000Z
>> StartUTC_OMI_Column_Amount_O3 : 2008-12-31T12:15:01.000000Z
>> PGEVersion_OMI_Column_Amount_O3 : "0.9.90"
>> TAI93At0zOfGranule_OMI_Column_Amount_O3 : 504921607
>> GranuleDayOfYear_OMI_Column_Amount_O3 : 1
>> [SNIP]
>>
>> dimensions:
>> XDim_OMI_Column_Amount_O3 = 1440
>> YDim_OMI_Column_Amount_O3 = 720
>> variables:
>> double YDim_OMI_Column_Amount_O3 ( YDim_OMI_Column_Amount_O3 )
>> projection : Geographic
>> Units : deg long_name : latitude
>> units : degrees_north
>>
>> double XDim_OMI_Column_Amount_O3 ( XDim_OMI_Column_Amount_O3 )
>> projection : Geographic Units : deg
>> long_name : longitude
>> units : degrees_east
>>
>> float RadiativeCloudFraction_OMI_Column_Amount_O3
>> ( YDim_OMI_Column_Amoun_O3, XDim_OMI_Column_Amount_O3 )
>> MissingValue : -1.267651e+30
>> ValidRange : 0
>> Offset : 0
>> ScaleFactor : 1
>> UniqueFieldDefinition : TOMS-OMI-Shared
>> Title : Radiative Cloud Fraction = fc*Ic331/Im331
>>
>> float ColumnAmountO3_OMI_Column_Amount_O3
>> ( YDim_OMI_Column_Amount_O3, XDm_OMI_Column_Amount_O3 )
>> MissingValue : -1.267651e+30
>> ValidRange : 50
>> Offset : 0
>> ScaleFactor : 1
>> UniqueFieldDefinition : TOMS-OMI-Shared
>> Title : Best Total Ozone Solution
>> units : DU
>> Units : DU
>> _FillValue : -1.267651e+30
>> long_name : ColumnAmountO3
>> projection : Geographic
>>
>> [SNIP]
>>
>>
>> On 4/19/10 9:49 AM, eddycarl wrote:
>>> Hi there,
>>> I am trying to use ncl_filedump in NCL 5.2.0 to read HDF5 format
>>> data,
>>> but I got the following error. Anyone helps to solve it please?
>>> Thanks!
>>> The data used here is the OMI/Aura Near UV Aerosol Optical Depth and
>>> Single Scattering Albedo Daily L3 Global 1x1 deg Lat/Lon data.
>>>
>>> ****** error message ******
>>> >> ncl_filedump OMI-Aura_L3-
>>> OMAERUVd_2010m0101_v003-2010m0105t104044.he5
>>> Copyright (C) 1995-2010 - All Rights Reserved
>>> University Corporation for Atmospheric Research
>>> NCAR Command Language Version 5.2.0
>>> The use of this software is governed by a License Agreement.
>>> See http://www.ncl.ucar.edu/ for more details.
>>> HDF5-DIAG: Error detected in HDF5 (1.8.4-patch1) thread 0:
>>> #000: GDapi.c line 897 in HE5_GDattach(): Grid:"Aerosol NearUV Grid"
>>> does not exist within HDF file.
>>> major: Object header
>>> minor: Object not found
>>> #001: H5Gdeprec.c line 299 in H5Gopen1(): unable to open group
>>> major: Symbol table
>>> minor: Can't open object
>>> #002: H5G.c line 947 in H5G_open_name(): group not found
>>> major: Symbol table
>>> &nbs p; minor: Object not found
>>> #003: H5Gloc.c line 468 in H5G_loc_find(): can't find object
>>> major: Symbol table
>>> minor: Object not found
>>> #004: H5Gtraverse.c line 877 in H5G_traverse(): internal path
>>> traversal
>>> failed
>>> major: Symbol table
>>> minor: Object not found
>>> #005: H5Gtraverse.c line 703 in H5G_traverse_real(): traversal
>>> operator
>>> failed
>>> major: Symbol table
>>> minor: Callback failed
>>> #006: H5Gloc.c line 423 in H5G_loc_find_cb(): object doesn't exist
>>> major: Symbol table
>>> minor: Object not found
>>> fatal:NclHDFEOS5: An internal HDF error occurred while reading
>>> (OMI-Aura_L3-OMAERUVd_2010m0101_v003-2010m0105t104044.he5) can't
>>> continue
>>> Variable: f (file variable)
>>>
>>> filename: OMI-Aura_L3-OMAERUVd_2010m0101_v003-2010m0105t104044
>>> path: OMI-Aura_L3-OMAERUVd_2010m0101_v003-2010m0105t104044.he5
>>> file global attributes:
>>> dimensions:
>>> variables:
>>>
>>>
>>>
>>>
>>> _______________________________________________
>>> ncl-talk mailing list
>>> List instructions, subscriber options, unsubscribe:
>>> http://mailman.ucar.edu/mailman/listinfo/ncl-talk
>> _______________________________________________
>> ncl-talk mailing list
>> List instructions, subscriber options, unsubscribe:
>> http://mailman.ucar.edu/mailman/listinfo/ncl-talk
>

_______________________________________________
ncl-talk mailing list
List instructions, subscriber options, unsubscribe:
http://mailman.ucar.edu/mailman/listinfo/ncl-talk
Received on Wed Apr 21 08:51:36 2010