offline: I have taken this data file transfer stuff offline.
Yes ... we can try the dropbox.
750MB is not that big, out ftp site has lots of space.
I got the othet file.
nrow = 299
ncol = 459
LonLat = asciiread("gridFile.csv",-1,"float")
print(LonLat)
--- Variable: LonLat Type: float Total Size: 1097928 bytes 274482 values Number of Dimensions: 1 Dimensions and sizes: [274482] Coordinates: Number Of Attributes: 1 _FillValue : 9.96921e+36 (0) -121.0211 (1) 21.62412 (2) -121.0503 (3) 21.7244 [SNIP] --- ; reshape to 2D lon2d = onedtond(LonLat( ::2), (/nrow,ncol/)) ; 0,2,4,... lat2d = onedtond(LonLat(1::2), (/nrow,ncol/)) ; 1,3,5,... --- On 02/04/2013 02:19 PM, Travis, Katherine wrote: > Dennis, > I got the gridFile.csv to work, but not the emis.nc file. > It keeps saying cannot create file. It is 750MB, is there enough space > for it? > If not, may I put it on dropbox and share it with you? > ~Katie > > On 2/4/13 3:12 PM, "Dennis Shea" <shea@ucar.edu> wrote: > >> Our systems people say that the ftp is working on our end. >> >> Did you remember to >> >> cd incoming >> >> prior to the 'put' command? >> >> ========================================= >> >> >> >> On 02/04/2013 12:46 PM, Travis, Katherine wrote: >>> Dennis, >>> I have attempted to put both files on the ftp site, with no luck. I get >>> the following error: >>> >>> ftp> put >>> >>> /Users/ktravis/Desktop/NEI06_ModelReady/emis_mole_all_20061231_12US1_cmaq >>> _c >>> b05_soa_E21_2007ed_06.nc >>> local: >>> >>> /Users/ktravis/Desktop/NEI06_ModelReady/emis_mole_all_20061231_12US1_cmaq >>> _c >>> b05_soa_E21_2007ed_06.nc remote: >>> >>> /Users/ktravis/Desktop/NEI06_ModelReady/emis_mole_all_20061231_12US1_cmaq >>> _c >>> b05_soa_E21_2007ed_06.nc >>> >>> 229 Entering Extended Passive Mode (|||49152|). >>> 553 Could not create file. >>> >>> ftp> put /Users/ktravis/Desktop/NEIData/gridFile.csv >>> local: /Users/ktravis/Desktop/NEIData/gridFile.csv remote: >>> /Users/ktravis/Desktop/NEIData/gridFile.csv >>> >>> 229 Entering Extended Passive Mode (|||49174|). >>> 553 Could not create file. >>> >>> >>> I think my last answer was cut off: >>> [3] I am just starting to learn NCL and NCO, so I am not yet familiar. >>> I have been working in R until this point. >>> >>> >>> I just downloaded NCO and am working on trying it out. >>> Thank you! >>> ~Katie >>> >>> On 2/4/13 12:59 PM, "Dennis Shea" <shea@ucar.edu> wrote: >>> >>>> Hi Katherine. >>>> >>>> Rather unusual looking dump .... This looks like >>>> fortran array ordering (ie, column major). I say this cuz >>>> the TSTEP is the rightmost dimension which is the slowest >>>> varying in fortran *and* it is unlimited. The netCDF >>>> software requires that the unlimited dimension be the >>>> slowest varying. >>>> >>>> Also, you did not answer ... Are you familiar with the >>>> netCDF operators and have available: ncks >>>> >>>> If you are not and you are going to deal with netCDF on a regular >>>> basis, I suggest you (or a system person) download and install >>>> these tools. They are not associated with NCL but in data processing >>>> you will likely have to use multiple tools. >>>> >>>> --- >>>> You can sent the two files to >>>> >>>> ftp ftp.cgd.ucar.edu >>>> anonymous >>>> email >>>> cd incoming >>>> put emis_mole_all_20061231_12US1_cmaq_cb05_soa_E21_2007ed_06.nc >>>> put ... the 2nd file with coordinate info ... >>>> quit >>>> >>>> after you have successfuly completed the transfer, >>>> send me or, better', ncl-talk@ucar.edu [don't cc me] >>>> that you have completed the transfer. >>>> --- >>>> >>>> We are asking that people respond only to ncl-talk (no personal cc). >>>> We all see the responses but we want to separate NCL >>>> related correspondence form other email. Many of us that >>>> respond on ncl-talk are not paid by the NCL project, we do it >>>> cuz we want to help people. >>>> >>>> Regards >>>> D >>>> >>>> On 02/04/2013 10:37 AM, Travis, Katherine wrote: >>>>> Dennis, >>>>> Thanks! I deleted most of the variables since there are 56, but here >>>>> is >>>>> everything else that comes out. >>>>> [1] >>>>> 1] "File emis_mole_all_20061231_12US1_cmaq_cb05_soa_E21_2007ed_06.nc >>>>> (NC_FORMAT_CLASSIC):" >>>>> [1] "" >>>>> [1] " 56 variables:" >>>>> [1] " int TFLAG[DATE-TIME,VAR,TSTEP] " >>>>> [1] " units: <YYYYDDD,HHMMSS>" >>>>> [1] " long_name: TFLAG " >>>>> [1] " var_desc: Timestep-valid flags: (1) YYYYDDD or (2) >>>>> HHMMSS " >>>>> [1] " float ACROLEIN[COL,ROW,LAY,TSTEP] " >>>>> [1] " long_name: ACROLEIN " >>>>> [1] " units: moles/s " >>>>> [1] " var_desc: Model species ACROLEIN >>>>> " >>>>> [1] " float ALD2[COL,ROW,LAY,TSTEP] " >>>>> [1] " long_name: ALD2 " >>>>> [1] " units: moles/s " >>>>> [1] " var_desc: Model species ALD2 >>>>> " >>>>> [1] "" >>>>> [1] " 6 dimensions:" >>>>> [1] " TSTEP Size:25 *** is unlimited ***" >>>>> [1] " DATE-TIME Size:2" >>>>> [1] " LAY Size:1" >>>>> [1] " VAR Size:55" >>>>> [1] " ROW Size:299" >>>>> [1] " COL Size:459" >>>>> [1] "" >>>>> [1] " 33 global attributes:" >>>>> [1] " IOAPI_VERSION: $Id: @(#) ioapi library version 3.0 $ >>>>> " >>>>> [1] " EXEC_ID: ???????????????? >>>>> " >>>>> [1] " FTYPE: 1" >>>>> [1] " CDATE: 2012314" >>>>> [1] " CTIME: 32930" >>>>> [1] " WDATE: 2012314" >>>>> [1] " WTIME: 32930" >>>>> [1] " SDATE: 2006365" >>>>> [1] " STIME: 0" >>>>> [1] " TSTEP: 10000" >>>>> [1] " NTHIK: 1" >>>>> [1] " NCOLS: 459" >>>>> [1] " NROWS: 299" >>>>> [1] " NLAYS: 1" >>>>> [1] " NVARS: 55" >>>>> [1] " GDTYP: 2" >>>>> [1] " P_ALP: 33" >>>>> [1] " P_BET: 45" >>>>> [1] " P_GAM: -97" >>>>> [1] " XCENT: -97" >>>>> [1] " YCENT: 40" >>>>> [1] " XORIG: -2556000" >>>>> [1] " YORIG: -1728000" >>>>> [1] " XCELL: 12000" >>>>> [1] " YCELL: 12000" >>>>> [1] " VGTYP: -1" >>>>> [1] " VGTOP: 0" >>>>> [1] " VGLVLS: 0" " VGLVLS: 0" >>>>> [1] " GDNAM: 12US1_459X299 " >>>>> [1] " UPNAM: MRGGRID " >>>>> [1] " VAR-LIST: ACROLEIN ALD2 ALD2_PRIMARY >>>>> ALDX BENZENE BUTADIENE13 CH4 CL2 >>>>> CO ETH ETHA ETOH >>>>> FORM >>>>> FORM_PRIMARY HCL HFLUX HONO >>>>> IOLE ISOP MEOH NH3 >>>>> NH3_FERT >>>>> NO NO2 NVOL OLE >>>>> PAL >>>>> PAR PCA PCL PEC >>>>> PFE PH2O PK PMC PMFINE >>>>> PMG PMN PMOTHR PNA >>>>> PNCOM >>>>> PNH4 PNO3 POC PSI >>>>> PSO4 PTI SO2 SULF TERP >>>>> TOL UNK UNR VOC_INV >>>>> XYL >>>>> " >>>>> [1] " FILEDESC: Area source emissions data >>>>> /FROM/ OPENMRGOUT >>>>> /VERSION/ $ >>>>> >>>>> /BASE YEAR/ 2008 >>>>> /NUMBER OF FILES/ >>>>> 1 >>>>> /FILE POSITION/ >>>>> 1 >>>>> /NUMBER OF >>>>> VARIABLES/ 20 >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> " >>>>> [1] " HISTORY: " >>>>> >>>>> >>>>> [2] This is just a .csv file with >>>>> Lat (dimension 459*299), lon (dimension 459*299) >>>>> >>>>> [3] I am just starting to learn NCL and NCO, so I am not yet familiar. >>>>> I have been working in R until this point. >>>>> >>>>> ~Katie >>>>> >>>>> On 2/4/13 12:29 PM, "Dennis Shea" <shea@ucar.edu> wrote: >>>>> >>>>>> A bit more information would be helpful. >>>>>> >>>>>> [1] What does >>>>>> >>>>>> %> ncl_filedump .... (or: ncdump -h ...) >>>>>> >>>>>> show for the the original file? >>>>>> >>>>>> [2] The same for the 2nd file containing the lat/lon coordinates >>>>>> >>>>>> [3] Are you familiar and have available the netCDF Operators? >>>>>> eg: the 'ncks' operator >>>>>> >>>>>> Cheers >>>>>> >>>>>> >>>>>> On 02/04/2013 10:24 AM, Travis, Katherine wrote: >>>>>>> Hi, >>>>>>> I have species data (NO, NO2 etc) with dimensions 459x299x25 for >>>>>>> lat/lon/time. However the lat and lon dimensions are 1-459 and >>>>>>> 1-299 >>>>>>> rather than actual lat/lon values. I have a lat and lon coordinate >>>>>>> for >>>>>>> each datapoint, and I want to append the netcdf file with this >>>>>>> information so that the actual grid points are associated with the >>>>>>> data. >>>>>>> Is there a simple way to do this? >>>>>>> Thanks, >>>>>>> -- >>>>>>> Katherine R. Travis >>>>>>> PhD Student >>>>>>> Harvard University >>>>>>> SEAS >>>>>>> ktravis@fas.harvard.edu >>>>>>> >>>>>>> >>>>>>> >>>>>>> _______________________________________________ >>>>>>> ncl-talk mailing list >>>>>>> List instructions, subscriber options, unsubscribe: >>>>>>> http://mailman.ucar.edu/mailman/listinfo/ncl-talk >>>>>>> >>>>>> >>>>> >>>> >>> >>> _______________________________________________ >>> ncl-talk mailing list >>> List instructions, subscriber options, unsubscribe: >>> http://mailman.ucar.edu/mailman/listinfo/ncl-talk >>> >> > _______________________________________________ ncl-talk mailing list List instructions, subscriber options, unsubscribe: http://mailman.ucar.edu/mailman/listinfo/ncl-talkReceived on Mon Feb 4 15:30:32 2013
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