Re: fatal:NclMalloc Failed:[errno=12]

From: Thomas Tobian <thomastobian_at_nyahnyahspammersnyahnyah>
Date: Tue Jul 02 2013 - 14:15:26 MDT

Hi Wei and Marry,

I solved it, by creating the looping in each year (3 Gb data) for 45 years
(3Gb*45=135 Gb).
It consumes 4-5 hours to run for the globe simulation with 50 layers.

Thanks
Thomas Tobian,

On Tue, Jul 2, 2013 at 11:24 PM, Wei Huang <huangwei@ucar.edu> wrote:

> THomas,
>
> I'd guess your data have lots of time-level as well.
> First try interpolate variable one by one (and delete
> it after processed them as Mary mentioned).
> Secondly, you may try to process variables
> one time-level each step.
>
> Arrange your variable carefully should do the work,
> unless your model grids are large than 2000 cubed.
>
> In that sense, you may still try to process your data
> slice by slice, which will allow your grids up to
> 30,000 cubed.
>
> Or the last, you may still do column by column,
> which should work for any grids (up to a 1G cubed).
> But that will take if not months, it will be weeks
> to process this one data.
>
> Wei
>
> huangwei@ucar.edu
> VETS/CISL
> National Center for Atmospheric Research
> P.O. Box 3000 (1850 Table Mesa Dr.)
> Boulder, CO 80307-3000 USA
> (303) 497-8924
>
>
>
>
>
>
> On Jul 2, 2013, at 6:39 AM, Thomas Tobian <thomastobian@gmail.com> wrote:
>
> Dear NCL,
>
> I have the output of the model with size 112 Gb. I've created the script to
> convert the data from sigma to pressure coordinate. We are using a super
> computer here with
> a large of memory size, but unfortunately I got this error
>
> *fatal:NclMalloc Failed:[errno=12]
> fatal:New: could not create new array:[errno=12]
> fatal:["Execute.c":7741]:Execute: Error occurred at or near line 31*
>
> Is there any work around to convert the sigma coordinate to pressure
> without splitting up the data?
>
> Regards,
> Thomas Tobian.
>
>
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Received on Tue Jul 2 14:15:39 2013

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