Re: Trouble passing array to f90 subroutine using WRAPIT

From: Dennis Shea <shea_at_nyahnyahspammersnyahnyah>
Date: Mon Aug 26 2013 - 09:07:22 MDT

Computer rule: Fastest varying dimension maps into fastest
varying dimension. NCL (row major like C) is 0 based and the
rightmost dimension varies fastest. Fortran is column major
and the leftmost dimension varies fastest.

Dimension order and subscripting are different for different languages.

     NCL: x(NA,NB,NC) <===> x(NC,NC,NA) : fortran

In computer memory, think of the arrays as a long linear list and the
elements are accessed via a particular language's conventions

See: page 37: http://www.ncl.ucar.edu/Document/Manuals/language_man.pdf

---
It should be:
C NCLFORTSTART
         subroutine writearr(ntim,nmod,xtas)
         integer ntim,nmod
         real xtas(nmod,ntim)
C NCLEND
Note:No data rearranging should be done.
On 8/26/13 8:47 AM, David Rasmussen wrote:
> Hi,
>
> I would like to write an array of data to a text file, similar to this
> request from a previous thread:
> http://www.ncl.ucar.edu/Support/talk_archives/2012/0230.html
>
> I have chosen to use WRAPIT to write my data to disk.
>
> I am trying to pass an array to an f90 subroutine, but NCL/WRAPIT keeps
> telling me that my array is not dimensioned correctly.
>
> I have an array defined in the driving NCL script as:
>
> xtas(ntim,nmod), where ntim=34675, nmod=33
>
> I would like to pass this array to a f90 routine. When I try and do this,
> the routine expects xtas to be dimensioned xtas(nmod,ntim) which is NOT how
> it is defined in the driving NCL script...
>
> fatal:writearr: dimension size of dimension (1) of xtas must be equal to
> the value of ntim
> fatal:["Execute.c":8128]:Execute: Error occurred at or near line 226 in
> file extract_BCSD_lat_lon.ncl
>
> The call to the routine in the NCL script is:
> WRITEARRAY::writearr(ntim,nmod,xtas)
>
> Immediately before calling the f90 routine, I do "printVarSummary(xtas)"...
>
> I get...
>
> Variable: xtas
> Type: float
> Total Size: 4577100 bytes
>              1144275 values
> Number of Dimensions: 2
> Dimensions and sizes: [34675] x [33]
> Coordinates:
> Number Of Attributes: 1
>    _FillValue : -999.999
>
> The print summary for xtas is as expected...xtas(ntim,nmod)...
>
> my stub file is:
>
> C NCLFORTSTART
>        subroutine writearr(ntim,nmod,xtas)
>        integer ntim,nmod
>        real xtas(ntim,nmod)
> C NCLEND
>
> my f90 routine is:
>
>        subroutine writearr(ntim,nmod,xtas)
>         integer ntim, nmod
>         real xtas(ntim,nmod)
>
>         print*, xtas
>
>         return
>        end subroutine writearr
>
> Both compile with no errors.
>
> Other info:
>
> WRAPIT Version: 120209
> OPERATING SYSTEM: Darwin
> FORTRAN COMPILER (f90c): gfortran
> FORTRAN COMPILER OPTIONS (fopts):  -m64 -fPIC -v -c -fno-second-underscore
> gcc -m64 -c -fno-common -I/usr/local/ncl-6.1.2/include WRAPIT.c
> COMPILING writearr.f90
> gfortran -m64 -fPIC -v -c -fno-second-underscore writearr.f90
> Using built-in specs.
> COLLECT_GCC=gfortran
> COLLECT_LTO_WRAPPER=/usr/local/gfortran/libexec/gcc/x86_64-apple-darwin11/4.6.2/lto-wrapper
> Target: x86_64-apple-darwin11
> Configured with: ../gcc-4.6.2-RC-20111019/configure
> --prefix=/usr/local/gfortran
> --with-gmp=/Users/fx/devel/gcc/deps-static/x86_64
> --enable-languages=c,c++,fortran,objc,obj-c++ --build=x86_64-apple-darwin11
> Thread model: posix
> gcc version 4.6.2 20111019 (prerelease) (GCC)
> COLLECT_GCC_OPTIONS='-mmacosx-version-min=10.8.3' '-m64' '-fPIC' '-v' '-c'
> '-fno-second-underscore' '-mtune=core2'
>   /usr/local/gfortran/libexec/gcc/x86_64-apple-darwin11/4.6.2/f951
> writearr.f90 -fPIC -quiet -dumpbase writearr.f90
> -mmacosx-version-min=10.8.3 -m64 -mtune=core2 -auxbase writearr -version
> -fPIC -fno-second-underscore -fintrinsic-modules-path
> /usr/local/gfortran/lib/gcc/x86_64-apple-darwin11/4.6.2/finclude -o
> /var/folders/fl/p8bxmn6x0gb7vk2qlzv90bdh0000gn/T//cc8VXUoN.s
> GNU Fortran (GCC) version 4.6.2 20111019 (prerelease)
> (x86_64-apple-darwin11)
> compiled by GNU C version 4.6.2 20111019 (prerelease), GMP version 5.0.2,
> MPFR version 3.0.1-p4, MPC version 0.9
> GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
> GNU Fortran (GCC) version 4.6.2 20111019 (prerelease)
> (x86_64-apple-darwin11)
> compiled by GNU C version 4.6.2 20111019 (prerelease), GMP version 5.0.2,
> MPFR version 3.0.1-p4, MPC version 0.9
> GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
> COLLECT_GCC_OPTIONS='-mmacosx-version-min=10.8.3' '-m64' '-fPIC' '-v' '-c'
> '-fno-second-underscore' '-mtune=core2'
>   as -arch x86_64 -force_cpusubtype_ALL -o writearr.o
> /var/folders/fl/p8bxmn6x0gb7vk2qlzv90bdh0000gn/T//cc8VXUoN.s
> COMPILER_PATH=/usr/local/gfortran/libexec/gcc/x86_64-apple-darwin11/4.6.2/:/usr/local/gfortran/libexec/gcc/x86_64-apple-darwin11/4.6.2/:/usr/local/gfortran/libexec/gcc/x86_64-apple-darwin11/:/usr/local/gfortran/lib/gcc/x86_64-apple-darwin11/4.6.2/:/usr/local/gfortran/lib/gcc/x86_64-apple-darwin11/
> LIBRARY_PATH=/usr/local/gfortran/lib/gcc/x86_64-apple-darwin11/4.6.2/:/usr/local/gfortran/lib/gcc/x86_64-apple-darwin11/4.6.2/../../../:/usr/lib/
> COLLECT_GCC_OPTIONS='-mmacosx-version-min=10.8.3' '-m64' '-fPIC' '-v' '-c'
> '-fno-second-underscore' '-mtune=core2'
> SHARED OBJECT NAME (SharedObj): writearr2.so
> LINKER SUFFIX (ld_suffix): WRAPIT.o writearr.o -L/usr/local/gfortran/lib/
> -o writearr2.so
>
> LINKING
> gcc -m64 -bundle -flat_namespace -undefined suppress WRAPIT.o writearr.o
> -L/usr/local/gfortran/lib/ -o writearr2.so -lgfortran
> END WRAPIT
>
> I must be missing something here. I am not trying to do anything
> complicated. Thanks in advance.
>
>
>
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Received on Mon Aug 26 09:07:27 2013

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