Re: addfile and HDF5 library version mismatch

I have the following HDF environmental variables set:

HDF4_ROOT=/admin/software/lucid/pgi-10.9/hdf4-4.2.5
HDF5_LIB_DIR=/admin/software/lucid/pgi-10.9/hdf5-1.8.5-patch1/lib
HDF5_ROOT=/admin/software/lucid/pgi-10.9/hdf5-1.8.5-patch1

Mark

On Feb 6, 2012, at 7:49 AM, Mary Haley wrote:

> Hi Mark,
>
> I was able to reproduce this error awhile back with the RedHat binaries, but not with the Debian binaries.
>
> Do you have any HDF environment variables set by any chance?
>
> env | grep HDF
>
> --Mary
>
>
> On Feb 3, 2012, at 5:21 PM, Mark Waylonis wrote:
>
>> I am getting the same problem when using addfile for an '.h5' file. I checked LD_LIBRARY_PATH, and the environmental variable is set correctly. I am running ncl_ncarg-6.0.0.Linux_Debian_x86_64_nodap_gcc432. Anyone have any ideas?
>>
>> Warning! ***HDF5 library version mismatched error***
>> The HDF5 header files used to compile this application do not match
>> the version used by the HDF5 library to which this application is linked.
>> Data corruption or segmentation faults may occur if the application continues.
>> This can happen when an application was compiled by one version of HDF5 but
>> linked with a different version of static or shared HDF5 library.
>> You should recompile the application or check your shared library related
>> settings such as 'LD_LIBRARY_PATH'.
>> You can, at your own risk, disable this warning by setting the environment
>> variable 'HDF5_DISABLE_VERSION_CHECK' to a value of '1'.
>> Setting it to 2 or higher will suppress the warning messages totally.
>>
>> Thank you!
>>
>>
>> _____________________________
>> Mark Waylonis
>> Graduate Student Researcher
>> University of California, Davis
>> Atmospheric Science Graduate Group
>> _____________________________
>>
>>
>>
>>
>>
>>
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>

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Received on Mon Feb 6 15:20:50 2012