Re: missing values

From: Dennis Shea <shea_at_nyahnyahspammersnyahnyah>
Date: Fri Jan 04 2013 - 14:36:24 MST

Did you do:
    clat = cos(ocean&lat*rad)
                 ^^^^^^^^^

On 1/4/13 2:32 PM, rafael dido wrote:
> Thanks for the response:
>
> Yes, i created lat in another line for different dataset (total precip,
> without masking). Ok, i will send the code, but the size is quite large ~
> 1.1 Gb. I will try again here. If in the end I am still not able figure out
> this matter, I will cut some of time steps and send the small data to ftp.
>
> Mary, here is the information:
>
> Variable: pocean
> Type: float
> Total Size: 132541920 bytes
> 33135480 values
> Number of Dimensions: 3
> Dimensions and sizes: [time | 4383] x [lat | 21] x [lon | 360]
> Coordinates:
> time: [8760..113928]
> lat: [ -10.. 10]
> lon: [ 0.. 359]
> Number Of Attributes: 3
> missing_value : -1e+34
> _FillValue : -1e+34
> ncl 26> print("min/max pocean = " + min(pocean) + "/" + max(pocean))
> *(0) min/max pocean = 0/560.664 ------> I guess it's realitic value and Ok.
> *
>
> I just wonder, why the plot is just fine but the areal average is incorrect.
> Thank you.
>
>
> Rafael.
>
>
>
>
>
>
>
>
> On Sat, Jan 5, 2013 at 5:54 AM, Mary Haley <haley@ucar.edu> wrote:
>
>> Rafael,
>>
>> If you are getting one single missing value, then something is likely
>> wrong with the data you are passing in.
>>
>> Did you look at pocean to make sure it is okay?
>>
>> printVarSummary(pocean)
>> print("min/max pocean = " + min(pocean) + "/" + max(pocean))
>>
>> --Mary
>>
>> On Jan 4, 2013, at 12:41 PM, rafael dido wrote:
>>
>> Hallo NCL Users,
>>
>> Thanks for the response,
>>
>> I meant, why did the result of the areal average either for land masking
>> or ocean masking in this case (precipitation over the ocean or land)
>> is equal to -999. I noticed in the previous email the the print value for
>> "ave" which is an areal average for sea is equal to missing value.
>>
>> What should i do thus i will obtain the real value of this calculation.
>>
>> my code
>> [snip]
>>
>> f = addfile("/projekt1/precip_ocean.nc","r") ; Read in first time
>> step and
>> pocean = f->psea(:,{-10:10},:)
>> pocean@_FillValue = pocean@missing_value
>> pocean@_FillValue = -999
>> printVarSummary(pocean)
>>
>> rad = 4.0*atan(1.0)/180.0
>> clat = cos(lat*rad)
>> ocean = dim_avg_Wrap( pocean(lat|:, lon|:, time|:) )
>> Ave = wgt_areaave(ocean, clat, 1.0, 1)
>> print(ave)
>>
>> [snip]
>>
>> --------------------------Result-------------------
>> Variable: Ave
>> Type: float
>> Total Size: 4 bytes
>> 1 values
>> Number of Dimensions: 1
>> Dimensions and sizes: [1]
>> Coordinates:
>> Number Of Attributes: 1
>> _FillValue : -999
>> *(0) -999 <------------------------------Areal Average of
>> precipitation over the Ocean*
>>
>>
>> Thanks,
>> Rafael
>>
>>
>>
>>
>>
>>
>>
>>
>>
>>
>> On Sat, Jan 5, 2013 at 3:57 AM, Mary Haley <haley@ucar.edu> wrote:
>>
>>> Rafael,
>>>
>>> I'm not sure what the problem is. Do you mean that you don't want a
>>> _FillValue of -999?
>>>
>>> If so, then in your script, you changed the _FillValue attribute to have a
>>> value of -999, which means when you take the average, it will also
>>> have a _FillValue attribute of -999.
>>>
>>> If you don't want -999 as a _FillValue, then remove this line:
>>>
>>>
>>> pocean@_FillValue = -999
>>>
>>>
>>> --Mary
>>>
>>>
>>> On Jan 4, 2013, at 10:49 AM, rafael dido wrote:
>>>
>>> Hi NCL,
>>>
>>> I have nc file containing missing value indicated by "_"
>>>
>>> dimensions:
>>> lon = 360 ;
>>> lat = 181 ;
>>> time = UNLIMITED ; // (4383 currently)
>>> variables:
>>> double lon(lon) ;
>>> lon:units = "degrees_east" ;
>>> lon:modulo = 360. ;
>>> lon:point_spacing = "even" ;
>>> lon:axis = "X" ;
>>> double lat(lat) ;
>>> lat:units = "degrees_north" ;
>>> lat:point_spacing = "even" ;
>>> lat:axis = "Y" ;
>>> double time(time) ;
>>> time:units = "hours since 1997-01-01 00:00:00" ;
>>> time:time_origin = "01-JAN-1997 00:00:00" ;
>>> time:axis = "T" ;
>>> float psea(time, lat, lon) ;
>>> * **psea:missing_value = -1.e+34f ;*
>>> * psea:_FillValue = -1.e+34f ;*
>>> // global attributes:
>>> :Conventions = "CF-1.0" ;
>>> data:
>>>
>>> psea =
>>> _, _, _, _, _, _, _, _, _, _, _, _, _, _, _, _, _, _, _, _, _, _, _, _,
>>> _,
>>> _, _, _, _, _, _, _, _, _, _, _, _, _, _, _, _, _, _, _, _, _, _, _,
>>> _,
>>> 0.02250607, 0.5173603, 0, 0, 0, 0, 0, 0, 0, 0.01500405, 0, 0, 0, 0, 0, 0,
>>> 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0,
>>> 0,
>>> _, _, _, _, _, _, _, _, _, _, _, _, _, _, _, _, _, _, _, _, _, _, _,
>>> _,
>>> _, _, _, _, _, _, _, _, _, _, _, _, _, _, _, 0, 0, 0.4348826,
>>> 0.05248583,
>>> 3.899931, 24.72732, 53.44849, 21.48183, 11.3707, 3.757559, 0.0299919,
>>>
>>> [SNIP]
>>>
>>> Once, I calculated the average for a specific domain i got the result is
>>> -999 as
>>> i set my command as follow:
>>>
>>> f = addfile("/projekt1/precip_ocean.nc","r") ; Read in first time
>>> step and
>>> pocean = f->psea(:,{-10:10},:)
>>> pocean@_FillValue = pocean@missing_value
>>> pocean@_FillValue = -999
>>> printVarSummary(pocean)
>>>
>>> rad = 4.0*atan(1.0)/180.0
>>> clat = cos(lat*rad)
>>> ocean = dim_avg_Wrap( pocean(lat|:, lon|:, time|:) )
>>> Ave = wgt_areaave(ocean, clat, 1.0, 1)
>>> print(ave)
>>>
>>> === [executed]
>>> Variable: Ave
>>> Type: float
>>> Total Size: 4 bytes
>>> 1 values
>>> Number of Dimensions: 1
>>> Dimensions and sizes: [1]
>>> Coordinates:
>>> Number Of Attributes: 1
>>> _FillValue : -999
>>> *(0) -999*
>>>
>>>
>>> Is there any hints how to handle this problem in NCL? When I used another
>>> language program,
>>> and I do not get any problem to calculate this average.
>>>
>>>
>>> Thanks
>>>
>>> RF.
>>>
>>>
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>>>
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Received on Fri Jan 4 14:36:30 2013

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