Re: Segmentation fault

From: Lin Su <Lin.Su_at_nyahnyahspammersnyahnyah>
Date: Fri, 2 May 2008 09:58:34 -0600 (MDT)

Dear Mary,

I am so glad that the scripts work perfect right now, and I like the modified
code you did, which is very neat and efficient!

Have a great weekend,
-Lin

---
Lin Su
http://atoc.colorado.edu/~sul/
---- Original message ----
>Date: Fri, 2 May 2008 08:17:18 -0600 (MDT)
>From: Mary Haley <haley_at_ucar.edu>  
>Subject: Re: Segmentation fault  
>To: Lin Su <Lin.Su_at_colorado.edu>
>Cc: ncl-talk_at_ucar.edu
>
>Lin,
>
>The problem appears to be a "running out of memory" situation. There
>are lots of arrays being created to hold individual error bars, and
>then several new variables created to attach each one of these error
>bars to an XY plot.
>
>I'll separately send you a modified version of your script that should
>fix this memory problem.
>
>I think there's definitely a problem at the NCL end, and I will
>report this to the developers.
>
>As a work-around, I suggest that if you need to attach a bunch of
>individual polylines to a plot using "gsn_add_polyline", to do this
>using one big X and Y array with missing values inserted to
>distinguish between individual lines.
>
>For example, let's say you wanted to add a bunch of horizontal lines
>at Y=1,2,3,...,50, with X going from 0 to 100. (I realize this is a
>bad example, but bear with me.)
>
>Instead of calling "gsn_add_polyline" 50 times to attach each individual
>line:
>
>   X1 = (/0,100/)
>   Y1 = (/1,  1/)
>   L1 = gsn_add_polyline(wks,plot,X1,Y1,gres)
>
>   X2 = (/0,100/)
>   Y2 = (/2,  2/)
>   L2 = gsn_add_polyline(wks,plot,X2,Y2,gres)
>
>   .
>   .
>   .
>   L50 = gsn_add_polyline(wks,plot,X50,Y50,gres)
>
>you can create one big X and Y array to hold all the lines, and call
>"gsn_add_polyline" once.  For example:
>
>    X = (/0,100,-999,0,100,-999,0,100,-999,..., 0,100,-999/)
>    Y = (/1,  1,-999,2,  2,-999,3,  3,-999,...,50, 50,-999/)
>
>    L = gsn_add_polyline(wks,plot,X,Y,gres)
>
>These missing values basically cause a "pen-up", so you effectively get
>individual lines.
>
>--Mary
>
>On Thu, 1 May 2008, Mary Haley wrote:
>
>> Hi Lin,
>>
>> That would be great you could personally email me your script and
>> data.
>>
>> By the way, and this is for everybody to know about: if you have a
>> complicated NCL script that does a lot of file input and processing,
>> sets a bunch of plot resources (maybe dependent on the input data),
>> and then calls some gsn_csm_xxxx script at the end, then for debugging
>> purposes, you can set the following resource:
>>
>>   res_at_gsnDebugWriteFileName = "some_name"
>>
>> before you call the gsn_csm_xxxx plotting function.
>>
>> This will cause only the data that is being plotted to be written to a
>> NetCDF file called "some_name.nc", and an NCL script called
>> "some_name.ncl" will be generated that reads this data file, and uses
>> the same resources that were used in the plotting script.
>>
>> This comes in handy if you just need to get the barebones script that
>> reads the data, sets the resources, and generates a plot.
>>
>> --Mary
>>
>> On Thu, 1 May 2008, Lin Su wrote:
>>
>>> Dear NCL users,
>>> 
>>> I am trying to add the AERONET error bar into the plot, but there is always
>>> showing the following errors:
>>> 
>>> ***************************
>>> .....
>>> **Warning**: PDF - coordinate out of range.
>>> **Warning**: PDF - coordinate out of range.
>>> **Warning**: PDF - coordinate out of range.
>>> Segmentation fault
>>> ************************
>>> 
>>> Is there a better way to add the error bar to the graph?  BTW, I will send 
>>> my ncl
>>> code and data to you if you'd like to take a look at them:)
>>> 
>>> I appreciate your great help in advance!
>>> 
>>> Best,
>>> -Lin
>>> ---
>>> Lin Su
>>> http://atoc.colorado.edu/~sul/
>>> 
>>> _______________________________________________
>>> ncl-talk mailing list
>>> ncl-talk_at_ucar.edu
>>> http://mailman.ucar.edu/mailman/listinfo/ncl-talk
>>> 
>> _______________________________________________
>> ncl-talk mailing list
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Received on Fri May 02 2008 - 09:58:34 MDT

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